Pharma Strategy Blog

Commentary on Pharma & Biotech Oncology / Hematology New Product Development

Posts tagged ‘inhibitors’

One of the things that is both frustrating and fascinating is the development of resistance to therapies in cancer treatment.  By this, I mean clearly it’s not something we want to see from a patient or physician perspective and if possible, to delay it as long as feasible.  On the other hand, the mechanics behind the biology of drug resistance is a fertile field for curious scientists.

I never fail to feel a sense of awe when a group cracks open new mechanisms that improve our understanding of cancer.  It is, after all, a highly complex and fickle topic. I’ve often wondered why is it that some patients see resistance set in early and others do not? Why does resistance occur, period?

This morning my interest was piqued by a new paper published this month in Science Translational Medicine from William Pao’s group at Vanderbilt. They looked at the conundrum around EGFR inhibitors such as erlotinib, gefitinib and afatinib in non-small cell lung cancer (NSCLC) because patients treated with these drugs eventually develop acquired resistance to therapy and the cancer unfortunately starts growing again.  The big question are why and what?

“The most common mechanism of resistance is a second site mutation within exon 20 of EGFR (T790M), observed in ~50% of cases. This change leads to altered binding of the drug within the ATP pocket.”

In this elegant research, they looked at the behaviour in cell lines before and after the cells acquire resistance to targeted therapy:

“Because both drugs were developed to target wild-type EGFR, we hypothesized that current dosing schedules were not optimized for mutant EGFR or to prevent resistance.

To investigate this further, we developed isogenic TKI-sensitive and TKI-resistant pairs of cell lines that mimic the behavior of human tumors.”

What they found was really interesting

In simple terms, they noticed that NSCLC cells grow at different rates, which may possibly explain why some tumours become resistant to EGFR inhibitors faster than others.

What was surprising though, is that EGFR mutant (resistant) cells grew at a slower rate:

“On average, parental cells doubled ~1.22 times faster than T790M-containing resistant cells.”

It isn’t yet clear why this happens though.

In clinical practice, it has been noticed that patients with acquired resistance have re-responded to tyrosine kinase inhibitor (TKI) therapy after a drug holiday.  Chmielecki et al., found some evidence as to why this might happen, since they observed that:

“Lysates from parental cells and late-passage PC-9/BR–resistant cells treated with BIBW-2992 showed significantly reduced phosphorylation of EGFR and its downstream targets, extracellular signal–regulated kinase (ERK) and AKT, whereas lysates from resistant cells maintained in the presence of TKI and treated with the same concentrations of drug did not.”

Once the validity of the preclinical findings were established, they looked at evolutionary modelling to design optimal dosing strategies for the use of EGFR inhibitors in NSCLC. They incorporated PK data from clinical trials to ensure the drug doses proposed were feasible. The modelling appeared to be useful:

“This modeling predicted alternative therapeutic strategies that could prolong the clinical benefit of TKIs against EGFR-mutant NSCLCs by delaying the development of resistance.”

It is worth noting the strategy predicted by the model:

“We propose the use of high-dose pulsed once-weekly BIBW-2992 with daily low-dose erlotinib to delay the emergence of T790M-mediated resistance. PC-9 cells treated with this regimen required twice as long to develop resistance and did not show selection for T790M mutations.

 

In patients, the combination of two EGFR TKIs could lead to overlapping toxicities involving rash and diarrhea. Thus, in a phase IB dose-safety trial, we would recommend a more tolerable strategy, with lower doses of erlotinib still known to be effective against EGFR-mutant tumors (25 or 50 mg daily, orally).”

What’s also fascinating to me is that the overall study findings make sense for consideration when using other TKIs as well, since we know that GIST patients treated with imatinib can re-respond after a period of drug holiday (see Fumagalli et al., (2009).  Could different dosing strategies be adopted in some patients at a high risk of developing resistance based on the model approach?

It will be most interesting to see whether clinical trials in lung cancer with EGFR inhibitors evolve along the lines of those suggested by the researchers – that will be the ultimate proof of the pudding that resistance can be influenced in patients with NSCLC – until then, it’s a valuable hypothesis.

References:

ResearchBlogging.orgChmielecki, J., Foo, J., Oxnard, G., Hutchinson, K., Ohashi, K., Somwar, R., Wang, L., Amato, K., Arcila, M., Sos, M., Socci, N., Viale, A., de Stanchina, E., Ginsberg, M., Thomas, R., Kris, M., Inoue, A., Ladanyi, M., Miller, V., Michor, F., & Pao, W. (2011). Optimization of Dosing for EGFR-Mutant Non-Small Cell Lung Cancer with Evolutionary Cancer Modeling. Science Translational Medicine, 3 (90), 90-90 DOI: 10.1126/scitranslmed.3002356

E. Fumagalli, P. Coco, C. Morosi, P. Dileo, R. Bertulli, A. Gronchi, & P. G. Casali (2009). Rechallenge with imatinib in GIST patients resistant to second or third line therapy 15th Connective Tissue Oncology Society Meeting, Miami Beach, FL

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Over the past few years it has been interesting to watch AACR organise and group it's sessions by pathways, so you end up with a higgledy piggledy collection of different inhibitors, therapeutics, chemotherapies etc as well as a mix of different tumour types.  This works well for the scientist, less so for the clinician who may specialise in only a few cancer types.  

Meanwhile, at ASCO, everything is organised by cancer track, so if you want to search for data on say, MEK, AKT or c-MET inhibitors for example, then the data is now all over the place and trying to get round and find it all is much more difficult.  The chances of missing something, or worse, having clashes in interesting sessions is much higher.  I'm already looking a potential schedule with too many clashes and periods of nothing.  That's not a very efficient way to organise the data, yet this was not something I experienced at AACR to the same extent.

image from farm4.static.flickr.comPersonally, I find myself much preferring the AACR approach because it's ultimately logical and allows you to see patterns and trends more strategically, providing you approach it sensibly. You do need to think in 3D though, much like that 3 level chess board beloved by Spock in the original Star Trek. This way allows you to see potential connections and future approaches more easily rather than being hemmed in by tumour siloes.

In the long run, I confidently predict that the future trend of personalised medicine is going to be more based on a pathways approach allied with mutational analysis based on constitutive activation, rather than simply thinking in terms of cancer type by line of therapy.  Once you start understanding which subsets exist and which inhibitors can be combined together, it is not hard to see a new world evolving out there that may lead to better outcomes and improved quality of life.

Who knows, we might even be able to get rid of toxic chemotherapies altogether and prescribe a cocktail of more targeted agents based on the patients characteristics.

Now that would be a fine thing indeed.  Thoughts?

Photo Credit: GiftsforyouBiz

One of the interesting things about scientific conferences such as AACR and ASCO is that everyone looks at the same data differently as if it were through a kaleidoscope.

Brand marketers focus on their competition by tumour type or disease, scientists look at specific mechanisms or pathways, investors look at particular companies and so on. 

Someone asked me the other day how I analyse the data.  I hadn't really thought about it much until then, but on reflection what I'm interested in is trends and how research evolves from a big picture science view so that means I look at pathways like a true biochemist.  This also teaches us where the gaps are and what opportunities may arise in the future.  It's not exactly rocket science, but it is a useful approach sometimes.

Phosphoinositide 3-kinasesImage via Wikipedia

One of the clear trends emerging at AACR the other week is that dual inhibition of both the PI3K-mTOR and RAS-ERK pathways may be necessary in some cancers such as melanoma to reduce cross-talk, feedback and feedforward loops, drug resistance and loss of PTEN gain of function, just as one might also target IGF-1R and EGFR to reduce cross-talk and add in another inhibitor, eg MEK or AKT.

Given the increasingly critical role of MEK and AKT in various combinations in the future to reduce the potential for drug resistance occurring, this bodes well for a host of companies.  I wasn't, therefore, surprised to see Novartis snap up Array's MEK inhibitor (ARRY-162) given they already have an mTOR on the market (everolimus, Afinitor), two PI3-kinases in development and others including a RAS inhibitor.  Having a MEK inhibitor as well may therefore give them a lot of flexibility with different combinations in multiple cancer types if this approach pans out. 

Merck are also following a similar approach with their mTOR inhibitor, ridaforolimus, which they have finally grabbed commercial control of from their partner, Ariad.  Let's not forget they also have an AKT inhibitor, dalotuzumab and a MEKi through their partnership with AstraZeneca to play with too.

This is all good news for several biotech companies though, if some big Pharma companies start catching onto the trend and realise they need may a PI3K-mTOR inhibitor and a MEK or AKT inhibitor to stock up in their pipeline before the field gets too crowded.

Which companies might have new and interesting data in this area?

Well, Keryx and Aeterna Zentaris, Semafore, Calistoga, Intellikine and a few others all have PI3K inhibitors in development, while Exelixis have a deal in place with sanofi-aventis for XL147 and XL765 and Roche/Genentech have a pan-PI3K inhibitor, GDC-0941.  Novartis have two (BEZ235 and BKM120). Some of these compounds are single PI3K inhibitors and some are dual inhibitors of PI3K-mTOR.

Looking at the ASCO abstract titles, Exelixis appear to have the most abstracts in this area this year, so it will be interesting to see what sort of data they have across a range of different tumour models and early phase I results in solid and hematologic malignancies, with a variety of different combinations. 

One session I'm really looking forward to at this year's ASCO is a Clinical Science Symposium entitled, "Paths for Clinical Development of PI3K Inhibition" with some of the heavyweights in the field such as Neil Rosen (MSKCC), Skip Burris (Sarah Cannon), Jose Baselga (Spain) and Carlos Arteaga (Vanderbilt).  Arteaga is presenting a talk in that session entitled, "Next steps in clinical development of PI3K inhibitors?"

More later on this blog after the posters and the data become available at the meeting.

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As many readers here on PSB know, I've not been a big fan of genome-wide molecular profiling, preferring an oncogene addiction approach to drug development and targeted cancer therapies. However, every once in a while something comes along that stops you in your tracks and makes you think differently.

This morning I was reading the latest copy of the New England Journal of Medicine over coffee and was fascinated by a review article by Drs Lenz and Staudt at the NCI on the molecular genetics of diffuse large-B-cell lymphomas (DLBCL), which account for 30-40% of newly diagnosed lymphomas.

As the review article points out, it is well know that different subsets of diffuse large-b-cell lymphomas are associated with different overall survival rates after initial anthracycline based therapy.  For example, it is more favourable in people with PMBL and the GCB subytype but less favourable in those with the ABC subtype.  R-CHOP therapy has improved survival in people with ABC, but the cure rates are still lower than those with the GCB subtype.  Gene expression signatures can help identify the subtypes and predict survival rates:

image from content.nejm.orgSource: NEJM

Current therapeutic treatment with chemotherapy has made headway in improved survival, but in order to make further headway, new approaches are very much needed.  Targeted therapies have now begun to expand clinical trial options. 

The article talks about numerous pathways, but I particularly liked this one, which details the Nuclear Factor kB (NFkB) signalling pathways in normal and malignant lymphocytes:

image from content.nejm.org
Source: NEJM

Essentially, signalling is initiated when a SRC family kinase ( SFK) phosphorylates tyrosines in the immunoreceptor tyrosine-based activation motifs (ITAMs) on B-cell subunits.  SYK is then recruited to the ITAMs through the SH2 domains and becomes active.  Many of you will remember SYK inhibition from previous posts on Rigel's fostamatinib, a SYK inhibitor.  I think Celgene also mentioned a SYK inhibitor in early development at their recent R&D Day, although the Rigel-AZ is further ahead but more erratic in it's results, at least in immune disorders.  A more recent paper in Blood looked promising in NHL and CLL, though.  Companies are clearly starting to look at specific inhibitors in the downstream pathway for lymphomas and chronic lymphocytic leukemia.

What's interesting about the cartoon above is that you can also see that phosphatidylinositol-3-kinase (PI3-kinase) is activated in parallel, activating the mTOR pathway.  These two targets are getting a lot of attention from Pharma in the clinic, especially in leukemias and lymphomas, and we may well see more of their latest development at AACR next week and ASCO in June.  Exelixis and their partner, sanofi-aventis (a client), for example, have already announced 12 abstracts at ASCO, including 6 on their PI3K and mTOR inhibitors, but they are focusing on lung cancer, a much more difficult carcinoma, rather than NHL, where there is a strong rationale.

It's good see new treatment modalities being tested in leukemias and lymphomas and not just solid tumours, where most companies inevitably focus due to the larger population sizes.  That said, the challenge in lymphoma is going to be identifying rational combinations that kill lymphoma cells synergistically.  As we learn more about the underlying biology of the disease, targets and biomarkers, so more effective and less toxic solutions may evolve.

ResearchBlogging.org
Lenz, G., & Staudt, L. (2010). Aggressive Lymphomas New England Journal of Medicine, 362 (15), 1417-1429 DOI: 10.1056/NEJMra0807082 

Friedberg, J., Sharman, J., Sweetenham, J., Johnston, P., Vose, J., LaCasce, A., Schaefer-Cutillo, J., De Vos, S., Sinha, R., Leonard, J., Cripe, L., Gregory, S., Sterba, M., Lowe, A., Levy, R., & Shipp, M. (2009). Inhibition of Syk with fostamatinib disodium has significant clinical activity in non-Hodgkin lymphoma and chronic lymphocytic leukemia Blood, 115 (13), 2578-2585 DOI: 10.1182/blood-2009-08-236471

South Texas Accelerated Research Therapeutics (START) has enrolled its first patient in a phase 1 clinical trial of a combination anticancer regimen made up of two investigational compounds.

The two drugs are being developed by Merck & Co. Inc. and AstraZeneca. The two pharmaceutical companies announced in June 2009 that they would collaborate on this project.

The START Center for Cancer Care in San Antonio was chosen as the first phase 1 center to test the drug combination. START specializes in conducting Phase 1 clinical trials for oncology drugs.

Preclinical evidence showed that the two compounds (MK-2206 and AZD6244) could enhance their anticancer properties.

The agreement between Merck and AstraZeneca is significant, say START officials, because it involves two major pharmaceutical companies collaborating at an early stage of drug development.

via bizjournals.com

This is the beginning of the collaboration between Merck and AZ that began last summer.

Merck's MK-2206 is an AKT inhibitor we originally discussed last year at ASCO (see http://www.pharmastrategyblog.com/2009/05/sanofiaventis-and-exelixis-agree-licensing-deal.html), while AstraZeneca's AZD6244 is a MEK inhibitor that has also been shown to target RAS and BRAF.

Anthony Tolcher's group at the START center in San Antonio are running the early trials, so it will be interesting to see what comes of the collaboration.

Posted via web from sally church's posterous

'Tis New Year's Eve and time to wish everyone all the best for 2010 from us at Pharma Strategy Blog. 2009 has been a very long year and it's time to draw it to a close and look forward rather than back.  A quick review of 2009 and a forward look at 2010 can be found here.  

Ice_age

All the comments, suggestions and email correspondence that we've received has been sincerely appreciated.  When this blog restarted in Feb 2008, I never thought it would be half as successful or as fun as it has been, so a big thank you to all our readers, we appreciate it and enjoy learning from you too.

For starters, today I'm going to resist the temptation to post the top 5 blogs of the year or even the five I liked the most, which are not necessarily the same thing, as that would be somewhat self serving.

Instead, I'm going to think about 5 things that I hope to see in 2010 and beyond gain some traction in the cancer field:

  1. Nanotechnology
  2. Maintenance therapy
  3. Better techniques for earlier detection of carcinomas
  4. Predictive and prognostic biomarkers
  5. Improvement in overall survival in NSCLC
  6. New inhibitors making progress such as MET/MEK/ALK

Nanotechnology got hot at AACR this year with several groups using nanocells to deliver more drug inside the tumour, to great effect.  Better options for maintenance therapy is very much needed, especially in AML, where there is a big need to improve durability of remission.  It seems odd that there are guidelines for such treatment in ALL but not AML. Time to change that, methinks.  

Obviously, the earlier you detect a cancer, can treat it with surgery with or without therapy, the better the long term survival. Numerous cancers are not detected until later stages, eg pancreatic cancer, but there is a lot of basic research going on to delineate biochemical changes that suggest a cancer is there. Biomarkers have only begun to scratch the surface in oncology; I have a feeling we will start to see more progress in this area next year, perhaps by AACR in April.

There are a number of exciting compounds in late stage (phase III) development, some of which may well have some interesting data at next year's ASCO.  Expect more posts on this throughout 2010.

Last, but by no means least, I've been following various MET/ALK and MEK inhibitors at AACR for a few years now and while they clearly may not be effective as single agent therapy, data may well mature next year in various combination trials.  Watch this space on that area!

What are you looking forward to in 2010?

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